Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009069.1 Corchorus capsularis cultivar CVL-1 contig09090, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17445

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2061--2123
30
2.1
30
87
0
90
9
20
44
25
1.82
4740--4803
23
2.9
23
75
11
71
10
23
42
23
1.86
4755--4884
33
3.9
33
83
7
113
10
27
40
21
1.87
5456--5489
10
3.0
12
83
16
54
5
26
41
26
1.78
5493--5540
21
2.3
21
77
0
51
12
37
25
25
1.91
5501--5547
21
2.2
21
88
0
67
8
34
27
29
1.87
8464--8537
30
2.5
30
80
4
87
16
20
21
41
1.90
8748--9241
154
3.2
154
88
1
758
40
19
16
22
1.91
11602--11708
33
3.2
33
84
2
135
22
39
28
9
1.85

Tables:   1

The End!