Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009071.1 Corchorus capsularis cultivar CVL-1 contig09092, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7925

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
188--219
14
2.3
14
94
0
55
37
0
0
62
0.95
504--533
2
15.5
2
93
6
53
50
0
0
50
1.00
937--982
22
2.1
22
95
0
83
21
34
10
32
1.88
1272--1344
30
2.4
30
100
0
146
30
15
36
17
1.91
1485--1525
21
2.1
20
86
13
59
39
9
26
24
1.86
5565--5625
26
2.3
26
88
5
88
22
19
6
50
1.70
5674--5805
27
4.9
25
78
15
131
20
24
2
53
1.57
5730--5860
65
2.0
65
85
2
174
19
23
2
54
1.56
5790--5862
27
2.7
28
79
12
89
19
23
2
54
1.56
5922--6330
22
18.1
23
68
18
91
23
19
4
52
1.64
6006--6333
22
14.9
22
71
15
196
23
20
4
50
1.66
6203--6324
20
5.9
20
78
7
136
24
18
4
51
1.66
6188--6333
42
3.5
41
77
9
150
23
19
4
52
1.65
6372--6440
30
2.3
30
92
0
120
24
15
10
49
1.76
7433--7505
16
4.7
15
91
3
110
4
13
41
41
1.64
7463--7542
6
12.5
6
72
21
56
3
18
43
33
1.68
7433--7505
31
2.3
32
92
2
121
4
13
41
41
1.64
7495--7540
17
2.7
17
90
6
67
2
21
50
26
1.60

Tables:   1

The End!