Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009076.1 Corchorus capsularis cultivar CVL-1 contig09097, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18573

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2677--2787
54
2.1
53
93
1
186
20
21
16
41
1.90
3767--3928
81
2.0
81
97
0
306
36
20
12
30
1.90
3887--3967
39
2.1
39
100
0
162
50
9
12
27
1.71
4588--4626
20
1.9
21
94
5
71
61
7
0
30
1.24
12974--12998
12
2.1
12
100
0
50
24
20
40
16
1.91
16137--16188
26
2.0
26
92
3
86
65
9
9
15
1.47
16128--16184
13
4.4
13
79
14
64
64
12
8
14
1.48
16545--16616
29
2.4
30
79
4
83
41
26
9
22
1.84

Tables:   1

The End!