Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009086.1 Corchorus capsularis cultivar CVL-1 contig09107, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15314

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2727--2805
27
2.9
27
84
3
97
43
24
16
16
1.87
3467--3549
40
2.0
41
93
2
141
33
19
20
26
1.96
4981--5010
15
1.9
16
93
6
53
46
26
13
13
1.80
5236--5323
32
2.8
32
87
0
131
39
36
9
14
1.78
5307--5340
17
2.1
17
94
5
61
32
35
14
17
1.91
6053--6082
15
2.1
14
93
6
51
33
0
0
66
0.92
6851--6880
15
2.0
15
93
0
51
43
30
20
6
1.77
7165--7189
13
1.9
13
100
0
50
20
24
8
48
1.76
11993--12017
13
1.9
13
100
0
50
20
24
8
48
1.76
12198--12224
14
1.9
14
100
0
54
51
14
11
22
1.73
12402--12445
15
3.0
15
86
3
54
65
0
0
34
0.93
13392--13433
20
2.1
20
91
8
68
11
7
4
76
1.15
13395--13440
19
2.5
19
82
10
60
15
4
4
76
1.11
14315--14366
27
1.9
27
100
0
104
34
3
13
48
1.61
14592--14860
75
3.6
75
95
1
466
41
6
17
34
1.75

Tables:   1

The End!