Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009102.1 Corchorus capsularis cultivar CVL-1 contig09123, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35600

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11095--11132
3
12.7
3
100
0
76
0
0
31
68
0.90
12097--12201
32
3.3
32
86
0
138
34
37
19
9
1.84
12097--12201
48
2.2
48
75
13
108
34
37
19
9
1.84
12097--12199
16
6.4
16
75
8
93
33
37
18
9
1.84
19646--19692
24
1.9
25
83
12
62
38
0
25
36
1.56
22039--22091
21
2.5
21
93
0
88
20
18
26
33
1.96
25845--26128
139
2.0
139
98
0
550
29
16
26
28
1.97
28058--28167
9
13.7
9
70
25
86
7
19
38
35
1.79
28058--28174
16
7.4
16
84
5
166
6
18
38
35
1.78
28056--28174
32
3.8
32
89
4
188
6
19
37
36
1.78
28980--29119
32
4.3
32
80
6
122
10
19
35
35
1.86
29028--29096
16
4.3
16
76
8
70
8
15
37
37
1.79
30858--30895
10
3.9
10
83
16
53
60
0
0
39
0.97
30988--31695
354
2.0
354
99
0
1398
40
18
13
27
1.88
33640--33745
45
2.4
45
98
0
203
35
4
18
40
1.72
34164--34192
13
2.2
13
100
0
58
44
0
41
13
1.44

Tables:   1

The End!