Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009108.1 Corchorus capsularis cultivar CVL-1 contig09129, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21731

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3691--3730
12
3.3
12
82
0
53
12
32
25
30
1.92
6582--6687
33
3.2
33
91
1
169
46
18
7
27
1.76
6697--6786
33
2.7
33
74
3
92
43
22
10
24
1.83
8293--8332
11
3.5
11
90
10
55
17
0
2
80
0.83
8294--8332
12
3.2
12
88
3
51
15
0
2
82
0.79
11300--11353
21
2.6
21
90
0
90
14
18
46
20
1.84
12725--12779
21
2.6
21
88
2
74
21
41
20
16
1.90
12876--12918
21
2.0
21
90
0
68
18
44
18
18
1.87
19997--20063
31
2.2
31
89
5
102
47
10
19
22
1.79
20194--20273
31
2.6
31
79
0
97
37
17
7
37
1.78

Tables:   1

The End!