Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009109.1 Corchorus capsularis cultivar CVL-1 contig09130, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33434

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2055--2190
30
4.5
30
90
0
209
19
41
27
11
1.85
4346--4381
19
1.9
18
88
5
54
33
22
2
41
1.68
4545--4583
20
1.9
21
84
5
53
56
2
20
20
1.54
7653--7692
20
2.0
20
85
5
53
67
7
0
25
1.16
10615--10645
14
2.2
14
100
0
62
16
12
35
35
1.87
14193--14228
19
1.9
18
88
5
54
33
22
2
41
1.68
14323--14361
20
1.9
21
84
5
53
56
2
20
20
1.54
23899--24000
33
3.2
33
88
4
138
47
18
8
25
1.78
30336--30371
19
1.9
18
88
5
54
33
22
2
41
1.68

Tables:   1

The End!