Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009112.1 Corchorus capsularis cultivar CVL-1 contig09133, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22077

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2699--2932
55
4.3
55
91
1
353
50
8
17
24
1.74
2767--2853
29
3.1
29
60
24
69
50
8
18
22
1.73
2781--2869
29
3.2
29
64
23
73
48
10
17
23
1.78
2699--2932
109
2.1
110
89
0
353
50
8
17
24
1.74
3164--3479
22
14.3
21
71
14
194
55
5
19
18
1.62
3168--3465
43
6.8
42
76
13
237
55
5
20
18
1.62
3159--3393
64
3.6
64
78
10
187
56
5
20
18
1.61
3342--3425
7
11.4
7
71
7
51
59
5
19
15
1.56
3358--3425
30
2.3
29
87
5
100
60
5
19
14
1.54
7784--7835
18
2.8
19
74
11
54
48
5
15
30
1.68
7881--7916
11
3.2
11
88
4
54
86
0
13
0
0.58
7881--7919
15
2.6
16
92
8
64
87
0
12
0
0.55
9714--9787
29
2.6
29
89
2
105
14
12
29
43
1.82
10835--11064
55
4.2
55
92
0
361
50
8
16
24
1.73
10903--10990
29
3.1
29
63
21
78
51
7
18
22
1.72
10891--10976
26
3.2
26
64
20
68
53
8
13
24
1.67
10917--11006
29
3.2
29
64
20
73
48
10
17
23
1.77
17601--17626
6
4.3
6
100
0
52
0
46
19
34
1.50
18343--18580
114
2.1
114
94
0
413
29
19
15
35
1.93
20990--21014
12
2.1
12
100
0
50
52
16
0
32
1.44

Tables:   1

The End!