Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009115.1 Corchorus capsularis cultivar CVL-1 contig09136, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40359

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9382--9417
18
2.0
18
94
0
63
25
0
19
55
1.43
12834--12863
16
1.9
15
93
6
51
13
40
33
13
1.83
13331--13387
13
4.3
12
79
16
51
28
1
8
61
1.36
26213--26239
2
13.5
2
100
0
54
48
0
0
51
1.00
26934--26964
2
15.5
2
100
0
62
48
0
0
51
1.00
29798--29880
22
3.8
22
75
3
78
40
12
12
34
1.79
30074--30104
6
5.2
6
100
0
62
67
16
0
16
1.23
34487--34515
2
14.5
2
100
0
58
48
0
0
51
1.00
34896--35202
22
14.1
22
70
13
134
41
11
15
32
1.82
35652--35682
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!