Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009119.1 Corchorus capsularis cultivar CVL-1 contig09140, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7571

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--35
2
17.5
2
100
0
70
51
0
0
48
1.00
83--114
16
2.1
16
88
11
50
68
0
0
31
0.90
1262--1318
17
3.4
16
80
7
60
26
19
19
35
1.95
2153--2181
2
14.5
2
100
0
58
51
0
0
48
1.00
2354--2402
19
2.5
19
80
9
55
53
6
10
30
1.59
5389--5445
30
1.9
30
96
0
105
40
12
7
40
1.70
6184--6319
34
4.2
33
81
3
141
16
37
32
13
1.88
6393--6472
32
2.5
33
86
8
103
12
35
41
11
1.79
6393--6486
32
2.9
32
83
9
102
12
35
40
11
1.80
6425--6544
33
3.7
32
83
8
109
12
31
39
16
1.86
6449--6544
33
2.9
32
86
7
115
13
29
38
18
1.89

Tables:   1

The End!