Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009121.1 Corchorus capsularis cultivar CVL-1 contig09142, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33869

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4838--4902
33
2.0
32
94
5
114
26
9
12
52
1.68
9324--9410
30
2.8
32
79
12
99
33
10
27
28
1.90
23340--23602
107
2.5
105
87
2
377
41
9
8
39
1.68
28272--28324
16
3.5
15
75
10
54
43
3
7
45
1.50
28415--28443
2
14.5
2
100
0
58
48
0
0
51
1.00
29219--29319
4
25.0
4
68
20
50
72
3
20
2
1.14
29796--29827
12
2.7
12
90
0
55
0
43
0
56
0.99
33103--33145
18
2.4
18
88
0
59
37
0
13
48
1.43

Tables:   1

The End!