Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009126.1 Corchorus capsularis cultivar CVL-1 contig09147, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15621

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73--114
14
2.7
15
82
14
50
54
2
28
14
1.52
1629--1672
19
2.2
19
84
8
52
56
2
6
34
1.38
2257--2314
29
2.0
29
96
0
107
18
20
17
43
1.89
2998--3077
28
2.8
28
90
5
115
36
13
25
25
1.92
6915--6997
2
44.0
2
75
15
70
54
2
1
42
1.21
10663--10729
32
2.1
32
100
0
134
20
2
28
47
1.65
10678--10733
18
3.3
18
63
27
50
25
3
25
46
1.69

Tables:   1

The End!