Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009131.1 Corchorus capsularis cultivar CVL-1 contig09152, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13186

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1689--1727
1
39.0
1
100
0
78
100
0
0
0
0.00
4110--4148
16
2.4
17
86
4
53
15
17
28
38
1.91
4168--4263
32
3.0
32
89
0
138
17
10
34
37
1.84
5153--5200
16
3.0
16
84
0
51
6
10
33
50
1.62
5455--5492
17
2.2
17
86
9
51
50
0
5
44
1.24
6836--7554
385
1.9
385
86
2
1032
34
20
10
35
1.86
6836--7573
386
1.9
384
85
3
1027
34
20
9
35
1.86
12238--12292
16
3.4
16
80
12
60
5
7
36
50
1.53

Tables:   1

The End!