Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009141.1 Corchorus capsularis cultivar CVL-1 contig09162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11045

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1648--2014
109
3.5
109
90
7
596
40
8
9
41
1.68
10105--10405
22
13.5
22
74
10
154
37
16
9
36
1.81
10307--10407
23
4.5
23
83
1
107
37
14
8
38
1.78
10321--10407
46
1.9
45
88
2
129
37
14
9
37
1.79
10326--10418
46
2.0
45
83
6
116
39
15
9
35
1.80
10393--10540
73
2.0
73
100
0
296
39
17
14
28
1.89
10497--10746
30
8.2
30
93
0
365
32
16
17
32
1.93
10497--10985
60
7.8
60
85
6
609
31
17
18
32
1.94
10707--10787
41
2.0
41
92
0
135
34
18
18
28
1.95
10647--10939
101
3.0
101
82
11
394
31
17
18
32
1.95
10748--10985
122
1.9
121
88
2
350
30
17
19
32
1.95
10748--10985
30
7.8
30
90
1
341
30
17
19
32
1.95

Tables:   1

The End!