Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009145.1 Corchorus capsularis cultivar CVL-1 contig09166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38690

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26--87
13
5.3
12
73
21
60
46
1
0
51
1.10
48--124
22
3.3
22
72
12
64
45
0
1
53
1.08
70--100
15
2.1
14
94
5
53
41
0
3
54
1.16
23--126
46
2.2
46
82
3
118
45
0
0
52
1.13
3609--3647
11
3.5
11
82
0
51
23
7
12
56
1.62
3612--3664
22
2.4
22
84
9
72
16
13
16
52
1.74
3967--4003
19
2.0
19
89
5
58
32
2
0
64
1.07
4118--4144
13
2.1
13
100
0
54
40
0
14
44
1.46
4350--4380
15
2.1
15
100
0
62
38
19
22
19
1.93
4373--4398
12
2.2
12
100
0
52
46
7
23
23
1.78
10317--10350
16
2.1
16
94
0
59
20
17
2
58
1.51
18027--18090
31
2.1
31
100
0
128
34
28
12
25
1.92
20726--20771
23
1.9
23
86
8
65
8
10
6
73
1.23

Tables:   1

The End!