Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009148.1 Corchorus capsularis cultivar CVL-1 contig09169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28471

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
968--992
13
1.9
13
100
0
50
40
0
4
56
1.18
2982--3046
32
2.0
34
87
6
98
20
24
3
52
1.61
2981--3059
32
2.7
28
71
21
79
20
24
3
51
1.63
7204--7234
6
5.3
6
96
3
55
35
0
12
51
1.40
9831--9879
21
2.3
21
96
0
89
46
28
20
4
1.68
13490--13518
6
5.0
6
95
4
51
34
0
13
51
1.42
15097--15154
3
19.3
3
100
0
116
32
0
0
67
0.91
20075--20138
3
21.3
3
100
0
128
67
0
0
32
0.91
20351--20375
12
2.1
12
100
0
50
84
0
0
16
0.63
28300--28334
2
17.5
2
87
0
52
51
5
0
42
1.25
28299--28336
20
1.9
20
100
0
76
50
10
0
39
1.37

Tables:   1

The End!