Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009149.1 Corchorus capsularis cultivar CVL-1 contig09170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10615

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
553--804
132
1.9
131
90
3
407
51
14
15
18
1.77
1995--2049
20
2.8
20
94
0
101
12
10
27
49
1.74
2519--2553
2
18.0
2
88
5
54
48
0
2
48
1.16
3273--3326
23
2.2
24
80
6
56
51
1
3
42
1.30
4151--4210
26
2.3
26
83
11
79
28
0
25
46
1.53
5280--5348
29
2.3
30
85
2
86
33
14
5
46
1.68
5563--5593
1
31.0
1
100
0
62
100
0
0
0
0.00
7556--7820
128
2.1
128
98
0
512
33
6
19
39
1.78
8729--8843
56
2.1
56
100
0
230
40
6
19
33
1.78
9124--9160
16
2.3
16
95
0
65
27
27
13
32
1.94

Tables:   1

The End!