Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009153.1 Corchorus capsularis cultivar CVL-1 contig09174, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39056

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15734--15762
13
2.2
13
100
0
58
48
13
20
17
1.81
16379--16410
13
2.5
13
89
0
55
37
25
0
37
1.56
16455--16498
10
4.2
11
85
8
56
47
29
0
22
1.51
26088--26161
21
3.5
21
75
0
76
21
33
10
33
1.88
27074--27098
1
25.0
1
100
0
50
0
0
0
100
0.00
34773--34869
29
3.4
28
78
2
104
31
28
23
15
1.95
35256--35292
18
2.0
18
94
5
65
75
0
0
24
0.80
35256--35293
19
2.0
19
94
0
67
76
0
0
23
0.79
35258--35299
19
2.2
19
86
0
57
80
0
2
16
0.81
35357--35449
11
7.1
14
65
22
58
33
2
8
55
1.42
35388--35455
26
2.6
26
86
9
102
33
1
10
54
1.43
37982--38017
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!