Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009154.1 Corchorus capsularis cultivar CVL-1 contig09175, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31872

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1253--1277
12
2.1
12
100
0
50
32
28
24
16
1.96
1347--1385
20
2.0
20
90
5
62
30
0
15
53
1.42
12624--12687
30
2.1
30
94
0
110
35
15
26
21
1.94
18349--18416
35
1.9
35
93
0
118
39
20
20
19
1.92
20044--20078
18
1.9
18
88
11
54
54
0
0
45
0.99
31835--31868
2
17.5
2
93
6
61
50
0
0
50
1.00

Tables:   1

The End!