Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009155.1 Corchorus capsularis cultivar CVL-1 contig09176, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5618

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3385--3449
30
2.1
31
88
2
96
27
20
3
49
1.64
3395--3456
30
2.0
31
87
6
90
32
16
3
48
1.62
3725--3929
44
4.7
42
80
9
187
33
10
18
38
1.85
3771--3875
42
2.4
43
92
3
167
34
13
16
36
1.87
3727--3922
22
8.9
22
80
10
136
34
10
17
37
1.84
4040--4088
22
2.2
22
82
13
57
28
10
20
40
1.85
4188--4382
44
4.5
44
77
8
186
43
8
12
35
1.73
4207--4355
66
2.3
66
80
4
158
42
9
12
35
1.75
4214--4380
88
1.9
87
84
9
223
43
9
12
34
1.75
4171--4379
22
9.4
22
71
17
132
44
8
11
35
1.71
4463--4530
19
3.5
19
73
4
55
44
13
19
23
1.85
4518--4810
22
13.5
22
69
11
95
40
8
14
36
1.77
4518--4725
44
4.9
43
72
10
124
41
9
14
35
1.78
4687--4766
23
3.5
23
77
1
81
41
5
12
41
1.65
4755--4821
22
3.0
22
84
4
64
34
10
13
41
1.79

Tables:   1

The End!