Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009156.1 Corchorus capsularis cultivar CVL-1 contig09177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5227

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
892--936
13
3.3
13
82
11
54
0
17
2
80
0.82
892--945
19
2.9
18
78
10
65
1
16
1
79
0.91
886--948
24
2.7
24
78
11
76
3
17
1
77
0.97
3129--3170
18
2.3
19
84
12
52
71
0
23
4
1.05
4844--4890
24
2.0
24
91
8
78
38
25
0
36
1.56

Tables:   1

The End!