Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009160.1 Corchorus capsularis cultivar CVL-1 contig09181, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27873

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
245--293
21
2.3
21
82
6
55
14
28
16
40
1.87
7899--7933
17
2.1
17
88
0
52
48
8
5
37
1.58
8778--8819
11
3.7
11
79
17
50
38
2
16
42
1.61
9633--9739
33
3.2
33
85
2
135
22
40
28
8
1.83
12322--12365
22
2.0
22
82
8
54
6
0
56
36
1.26
15617--15666
26
1.9
26
91
0
82
42
22
18
18
1.90
27598--27868
39
6.8
39
81
12
327
22
23
8
45
1.80
27605--27868
75
3.3
77
83
10
284
23
23
8
44
1.81

Tables:   1

The End!