Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009165.1 Corchorus capsularis cultivar CVL-1 contig09186, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31466

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--48
2
19.0
2
100
0
76
0
50
0
50
1.00
8972--9042
37
1.9
37
85
5
99
40
14
16
28
1.87
15007--15084
29
2.6
30
82
9
81
50
16
8
24
1.74
27621--27668
21
2.3
21
78
7
53
29
10
29
31
1.90
28788--28837
19
2.5
20
75
15
59
6
12
34
48
1.65
29745--29805
31
2.0
31
90
0
95
26
26
14
32
1.95

Tables:   1

The End!