Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009169.1 Corchorus capsularis cultivar CVL-1 contig09190, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33338

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3333--3359
7
3.9
7
100
0
54
0
11
0
88
0.50
19185--19383
44
4.7
43
74
15
164
41
9
14
35
1.77
19351--19457
23
4.7
23
81
4
103
40
9
14
36
1.78
19351--19456
45
2.4
45
82
3
124
40
9
13
36
1.77
19185--19499
22
14.6
22
69
15
115
40
8
14
36
1.77
19224--19538
172
1.8
170
79
5
357
38
8
15
37
1.78
19632--19739
22
4.9
22
70
8
85
44
7
12
35
1.71
23406--23451
18
2.6
17
80
10
56
19
6
21
52
1.69
24199--24264
27
2.7
23
75
18
71
56
4
27
12
1.55
25291--25364
28
2.5
29
80
10
87
27
12
6
54
1.62
26720--26778
29
2.1
29
87
6
86
20
8
16
54
1.68
31199--31309
38
3.0
38
85
7
165
29
24
12
33
1.92

Tables:   1

The End!