Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009186.1 Corchorus capsularis cultivar CVL-1 contig09207, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57112

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7157--7181
2
12.5
2
100
0
50
48
0
0
52
1.00
7850--7884
3
11.7
3
100
0
70
34
0
0
65
0.93
8668--8700
16
2.0
17
88
5
50
54
27
6
12
1.60
11221--11263
18
2.4
19
81
18
56
44
0
4
51
1.22
15007--15147
74
2.0
72
91
5
232
14
34
23
26
1.94
15205--15322
23
5.0
23
79
6
128
47
10
28
13
1.75
15194--15291
49
2.0
49
96
4
180
48
12
24
14
1.77
15460--15507
25
1.9
25
95
0
87
22
39
16
20
1.92
15452--15572
60
2.0
60
95
0
215
27
41
11
19
1.86
15520--15567
25
1.9
25
86
0
69
29
37
12
20
1.90

Tables:   1

The End!