Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009190.1 Corchorus capsularis cultivar CVL-1 contig09211, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6458

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
782--1882
324
3.4
321
81
6
1205
33
13
17
35
1.89
1369--2499
572
2.0
566
84
5
1487
33
15
17
33
1.91
1940--3384
640
2.2
648
83
4
1879
32
14
17
35
1.90
1940--3391
325
4.5
323
83
5
1788
32
14
17
35
1.90
2845--3965
579
1.9
577
93
1
1917
31
15
17
35
1.91
3404--5089
325
5.2
322
85
4
2178
33
14
16
34
1.90
3422--6458
652
4.7
650
83
6
3617
33
14
17
34
1.90
5084--6458
322
4.3
320
84
5
1737
32
14
17
35
1.91

Tables:   1

The End!