Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009191.1 Corchorus capsularis cultivar CVL-1 contig09212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33121

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34--973
322
2.9
321
89
4
1365
33
13
17
35
1.89
680--1267
294
2.0
294
87
2
860
34
12
18
34
1.89
974--5104
322
12.8
323
84
4
4880
33
14
16
35
1.90
974--5104
965
4.3
968
84
4
5017
33
14
16
35
1.90
6490--6582
43
2.2
43
92
1
152
27
13
15
43
1.85
10837--10861
1
25.0
1
100
0
50
100
0
0
0
0.00
16505--16550
21
2.2
20
85
11
58
63
4
32
0
1.14
17204--17232
14
2.1
14
100
0
58
34
6
6
51
1.55
18946--18972
10
2.7
10
100
0
54
25
0
22
51
1.48

Tables:   1

The End!