Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009192.1 Corchorus capsularis cultivar CVL-1 contig09213, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65615

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11233--11262
15
1.9
16
93
6
53
60
0
26
13
1.34
35210--35248
13
2.9
13
96
3
69
53
25
20
0
1.45
35731--35774
23
1.9
23
90
0
70
22
29
6
40
1.80
44469--44508
1
40.0
1
100
0
80
0
0
0
100
0.00
44956--45109
49
3.1
49
63
23
124
49
20
9
20
1.77
44869--45162
98
3.0
98
98
0
570
48
21
9
19
1.77
45122--45186
31
2.1
31
97
0
121
41
21
15
21
1.90
45212--45432
111
2.0
109
97
1
415
46
19
18
16
1.85
57501--57634
70
1.9
70
100
0
268
32
25
6
35
1.82
59400--59424
2
12.5
2
100
0
50
52
0
48
0
1.00

Tables:   1

The End!