Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009194.1 Corchorus capsularis cultivar CVL-1 contig09215, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12637

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
280--653
200
1.9
200
97
1
705
36
16
9
37
1.81
480--2971
316
7.9
321
76
8
2192
36
16
13
33
1.88
480--2971
637
3.9
634
82
7
2752
36
16
13
33
1.88
3491--4872
26
53.8
25
82
9
1401
34
23
14
28
1.94
3500--3645
31
5.0
31
81
9
134
37
20
14
27
1.91
3491--4872
52
26.9
52
83
8
1604
34
23
14
28
1.94
4653--4733
16
5.8
16
63
31
60
29
23
19
27
1.98
4932--5095
35
4.5
35
78
9
150
37
15
20
26
1.92

Tables:   1

The End!