Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009196.1 Corchorus capsularis cultivar CVL-1 contig09217, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62031

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1208--1313
53
2.0
53
100
0
212
45
11
7
35
1.69
5541--5589
17
2.9
16
80
11
53
22
22
24
30
1.99
5753--5778
2
13.0
2
100
0
52
50
0
0
50
1.00
6921--6959
2
19.5
2
84
10
53
48
2
2
46
1.29
29667--29691
12
2.1
12
100
0
50
48
0
16
36
1.46
51078--51103
12
2.2
12
100
0
52
23
0
7
69
1.14
55169--55198
13
2.3
13
100
0
60
23
6
20
50
1.71
57462--57508
23
2.0
23
83
0
58
21
21
10
46
1.81

Tables:   1

The End!