Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009202.1 Corchorus capsularis cultivar CVL-1 contig09223, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62532

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4473--4601
69
1.9
69
90
0
204
37
21
18
22
1.94
17375--17401
1
27.0
1
100
0
54
0
100
0
0
0.00
17855--17904
18
2.8
18
84
6
57
24
36
24
16
1.94
17868--17923
18
3.1
18
79
7
60
19
44
21
14
1.86
26987--27036
24
2.1
24
84
0
64
20
22
36
22
1.96
34612--34673
32
1.9
33
87
9
92
43
20
6
29
1.77
35613--35645
2
16.5
2
100
0
66
51
0
0
48
1.00
36862--37186
162
2.0
162
96
0
596
38
14
19
27
1.91
37462--37493
16
2.0
16
100
0
64
37
31
6
25
1.81
40544--40776
70
3.2
71
85
10
310
49
0
12
37
1.45
40538--40776
78
3.2
77
90
7
359
49
0
12
37
1.44
51687--51722
2
18.0
2
100
0
72
50
0
0
50
1.00
58703--59138
221
2.0
215
91
2
701
29
16
12
40
1.86
58999--59632
345
1.8
345
90
1
1029
28
18
14
38
1.90

Tables:   1

The End!