Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009205.1 Corchorus capsularis cultivar CVL-1 contig09226, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62948

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5292--5343
25
2.1
25
100
0
104
53
3
23
19
1.61
12847--12875
3
9.7
3
100
0
58
31
0
0
68
0.89
28886--28934
25
2.0
24
92
7
82
46
12
4
36
1.60
50551--50650
32
3.1
32
100
0
200
13
38
34
15
1.85
51972--51997
13
2.0
13
100
0
52
0
0
7
92
0.39

Tables:   1

The End!