Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009211.1 Corchorus capsularis cultivar CVL-1 contig09232, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19279

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2888--2970
27
3.1
26
81
13
105
16
69
1
12
1.24
2984--3033
24
2.1
24
88
0
73
12
68
10
10
1.41
2987--3056
27
2.6
27
86
0
95
10
67
11
11
1.43
12327--12367
19
2.4
16
78
21
55
43
34
0
21
1.53
12332--12370
19
2.1
19
100
0
78
41
33
0
25
1.56

Tables:   1

The End!