Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009214.1 Corchorus capsularis cultivar CVL-1 contig09235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10326

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2215
645
3.4
643
87
2
3026
33
14
17
35
1.89
71--2308
328
6.9
319
76
8
1891
33
13
17
35
1.89
7226--7322
22
4.6
22
65
23
73
37
12
9
41
1.75
7347--7994
22
30.0
21
68
15
263
35
15
9
38
1.80
7226--7377
62
2.5
62
94
0
259
34
13
9
42
1.76
7615--7716
46
2.3
44
83
6
116
38
14
8
38
1.78
8032--8137
22
4.8
22
75
6
90
32
16
10
40
1.83
8845--8941
38
2.6
36
73
7
95
57
8
17
16
1.62

Tables:   1

The End!