Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009226.1 Corchorus capsularis cultivar CVL-1 contig09247, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22884

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2572--2605
2
17.0
2
100
0
68
50
0
0
50
1.00
5316--5342
7
3.9
7
100
0
54
11
14
0
74
1.08
6007--6035
1
29.0
1
100
0
58
100
0
0
0
0.00
15766--15825
27
2.3
27
85
2
77
61
6
1
30
1.31
17013--17052
18
2.3
18
86
4
55
2
27
0
70
1.01
22458--22496
20
2.0
20
89
0
60
48
7
7
35
1.61
22534--22573
20
2.0
21
90
5
64
55
10
7
27
1.60

Tables:   1

The End!