Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009237.1 Corchorus capsularis cultivar CVL-1 contig09258, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20010

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2848--2887
13
3.1
13
85
0
53
45
15
15
25
1.84
2880--2910
11
2.8
11
90
0
53
32
9
22
35
1.87
4950--5000
26
2.0
26
92
0
84
43
15
11
29
1.82
19291--19324
2
17.5
2
93
6
61
50
0
0
50
1.00
19949--19996
22
2.2
22
82
14
55
2
8
8
81
0.96

Tables:   1

The End!