Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009238.1 Corchorus capsularis cultivar CVL-1 contig09259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26592

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3250--3305
25
2.2
25
93
0
94
25
26
28
19
1.99
4069--4104
16
2.2
16
90
0
54
0
36
0
63
0.94
4120--4157
15
2.5
15
91
0
58
2
23
0
73
0.95
4074--4179
56
1.9
56
83
9
137
7
25
0
66
1.17
4945--4970
8
3.2
8
100
0
52
88
0
11
0
0.52
9201--9226
2
13.0
2
100
0
52
50
0
0
50
1.00
9365--9457
48
1.9
48
100
0
186
44
4
10
40
1.59
9512--9567
16
3.7
16
73
22
66
42
10
5
41
1.62
23235--23279
21
2.1
21
95
0
81
42
31
15
11
1.82

Tables:   1

The End!