Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009246.1 Corchorus capsularis cultivar CVL-1 contig09267, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37537

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3036--3064
2
15.0
2
92
7
51
51
0
0
48
1.00
23499--23528
12
2.5
12
100
0
60
93
0
6
0
0.35
24781--24813
17
1.9
17
88
11
50
21
6
9
63
1.45
29161--29196
18
2.0
18
94
0
63
44
25
16
13
1.85
30294--30535
107
2.3
107
89
0
376
43
8
6
41
1.60
30294--30566
107
2.6
106
86
4
370
43
8
5
41
1.60
32238--32275
16
2.4
16
82
4
51
5
13
39
42
1.66

Tables:   1

The End!