Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009249.1 Corchorus capsularis cultivar CVL-1 contig09270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10156

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2302--2333
3
10.7
3
100
0
64
65
0
0
34
0.93
5148--5304
43
3.7
43
85
3
201
42
16
27
14
1.86
5321--5504
100
1.8
100
91
2
307
36
16
23
22
1.94
5453--5552
52
1.9
52
85
4
139
38
22
26
14
1.91
7979--8028
24
2.1
23
88
3
73
12
18
22
48
1.80
10125--10156
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!