Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009250.1 Corchorus capsularis cultivar CVL-1 contig09271, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32069

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10699--10765
27
2.7
25
84
9
75
53
13
2
29
1.54
10844--10920
40
1.9
40
100
0
154
51
22
0
25
1.48
11815--11847
17
1.9
17
93
0
57
27
9
36
27
1.87
12199--12561
156
2.3
155
78
8
346
34
18
15
30
1.93
13561--13634
38
1.9
38
100
0
148
47
2
5
44
1.40
15040--15074
17
2.2
17
90
10
56
5
14
0
80
0.89
16184--16381
105
1.9
108
85
5
278
46
12
5
34
1.65
16986--17037
17
2.9
18
80
5
61
50
15
21
13
1.78
18160--18186
13
2.1
13
100
0
54
44
0
14
40
1.46
20823--21138
105
3.0
105
95
0
569
30
26
11
32
1.91
22102--22178
29
2.6
29
76
13
77
35
27
12
24
1.92
22315--22389
31
2.4
31
100
0
150
32
9
26
32
1.88
26974--27035
30
2.1
30
87
0
88
38
19
22
19
1.93
31604--31633
3
10.0
3
100
0
60
66
0
33
0
0.92
32018--32069
2
26.0
2
100
0
104
50
0
50
0
1.00

Tables:   1

The End!