Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009255.1 Corchorus capsularis cultivar CVL-1 contig09276, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19964

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118--210
11
7.1
14
65
22
58
33
2
8
55
1.42
149--216
26
2.6
26
86
9
102
33
1
10
54
1.43
225--284
25
2.5
25
86
5
79
43
0
20
36
1.52
354--398
21
2.1
22
83
4
56
42
8
35
13
1.75
6156--6241
42
2.0
42
95
0
154
50
15
12
22
1.77
6996--7048
24
2.2
24
100
0
106
33
7
7
50
1.59
7062--7138
39
2.0
39
84
5
102
31
11
14
42
1.81
7107--7173
34
2.0
34
88
5
100
31
11
13
43
1.80
19580--19615
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!