Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009269.1 Corchorus capsularis cultivar CVL-1 contig09290, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17646

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
724--814
33
2.8
33
81
0
101
10
32
34
21
1.89
2212--2362
80
1.9
77
84
6
196
28
17
13
40
1.87
2289--2407
33
3.5
33
86
5
141
28
16
12
42
1.85
2384--2418
19
1.9
17
88
11
52
25
20
8
45
1.79
3016--3374
104
3.5
104
90
4
523
42
8
7
41
1.62
9455--9985
269
2.0
267
91
0
855
25
22
24
27
2.00
12376--12449
25
3.2
25
60
25
63
40
17
13
28
1.87
12365--12457
43
2.2
43
96
0
168
36
16
18
29
1.92

Tables:   1

The End!