Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009277.1 Corchorus capsularis cultivar CVL-1 contig09298, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25843

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1899--1963
26
2.5
26
82
5
78
43
20
20
16
1.89
8327--8360
17
2.0
17
88
0
50
20
17
0
61
1.34
8346--8397
19
2.8
19
85
2
79
5
19
0
75
1.01
8337--8404
18
3.7
18
76
3
55
11
17
0
70
1.16
12346--12419
26
2.8
25
84
12
87
41
25
16
16
1.88
15025--15054
9
3.3
9
95
0
51
66
6
13
13
1.43
22109--22149
18
2.2
19
86
4
57
4
53
2
39
1.35
23911--23948
18
2.1
18
100
0
76
44
23
10
21
1.83
24537--24839
128
2.4
124
84
5
344
38
17
22
21
1.93
24605--24839
64
3.7
64
91
2
373
38
17
22
21
1.93
25758--25791
1
34.0
1
100
0
68
0
0
0
100
0.00
25668--25766
46
2.2
46
87
3
137
10
22
8
59
1.55

Tables:   1

The End!