Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009284.1 Corchorus capsularis cultivar CVL-1 contig09305, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22944

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1635--1690
24
2.4
23
88
5
85
58
7
28
5
1.46
4363--4396
16
2.1
16
100
0
68
88
11
0
0
0.52
5705--5995
146
2.0
147
85
0
395
23
31
13
31
1.93
5705--5995
49
6.0
49
87
0
395
23
31
13
31
1.93
21360--21390
13
2.4
13
94
0
53
87
9
3
0
0.66
22701--22944
49
5.0
50
88
4
365
24
32
13
30
1.93
22701--22944
97
2.5
98
89
2
375
24
32
13
30
1.93

Tables:   1

The End!