Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009288.1 Corchorus capsularis cultivar CVL-1 contig09309, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45036

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80--106
4
6.8
4
100
0
54
25
0
22
51
1.48
948--1004
17
3.2
17
76
13
60
28
3
21
47
1.67
945--996
17
2.8
19
80
14
63
26
3
25
44
1.71
3887--3931
13
3.2
14
90
9
74
0
62
0
37
0.96
6247--7081
35
23.9
35
86
5
1098
30
16
18
33
1.94
14762--14815
1
54.0
1
92
0
81
94
1
0
3
0.36
14763--14808
24
1.9
24
100
0
92
95
0
0
4
0.26
33410--33456
24
2.0
24
95
0
85
44
19
4
31
1.70
36719--36762
21
2.0
23
86
8
65
47
15
4
31
1.66
38017--38089
23
3.1
22
75
11
65
23
2
8
65
1.33
38624--38685
16
3.8
16
75
10
54
32
50
16
1
1.55
38666--38699
17
1.9
18
88
5
52
23
55
20
0
1.43
39173--39197
4
6.2
4
100
0
50
0
24
0
76
0.80

Tables:   1

The End!