Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009290.1 Corchorus capsularis cultivar CVL-1 contig09311, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30518

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58--187
26
5.5
23
67
22
74
47
2
0
49
1.19
52--188
2
73.5
2
68
16
53
47
2
0
49
1.18
9423--9453
2
15.5
2
100
0
62
0
48
0
51
1.00
9454--9490
2
18.5
2
100
0
74
51
48
0
0
1.00
13029--13331
48
6.3
48
73
5
175
22
2
50
24
1.61
13065--13693
48
13.1
48
81
1
553
24
4
49
21
1.67
13432--13564
21
5.8
21
69
22
79
25
5
49
19
1.69
16534--16564
15
2.1
15
93
0
53
29
0
54
16
1.42
16409--16917
144
3.5
144
82
5
564
21
2
50
25
1.61
16742--16830
27
3.5
27
72
17
82
19
3
51
25
1.62
16415--16839
96
4.4
97
84
2
468
20
2
51
26
1.58
16421--17012
48
12.4
48
79
3
411
22
3
50
24
1.63
16415--17012
96
6.2
97
81
4
464
22
3
50
24
1.63
16409--16995
144
4.1
143
80
3
534
22
2
51
23
1.62
22813--22918
53
2.0
53
100
0
212
18
26
11
43
1.84
30474--30498
13
1.9
13
100
0
50
44
8
32
16
1.76

Tables:   1

The End!