Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009296.1 Corchorus capsularis cultivar CVL-1 contig09317, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30754

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12594--12631
19
2.0
19
100
0
76
52
0
10
36
1.36
12747--12772
5
5.2
5
100
0
52
19
42
19
19
1.90
19939--19979
21
2.0
21
85
9
57
51
0
34
14
1.43
22196--22816
21
29.6
21
79
4
601
39
21
11
28
1.87
22981--23029
25
2.0
25
92
8
82
38
14
0
46
1.44
24204--24248
2
23.0
2
81
4
56
48
2
4
44
1.35
24294--24361
2
35.5
2
73
8
52
45
2
4
47
1.38
29537--29570
13
2.6
13
85
0
50
20
17
2
58
1.51
29983--30021
17
2.2
19
86
9
55
35
2
0
61
1.10
30564--30608
21
2.1
22
84
12
58
20
33
8
37
1.83
30657--30754
33
3.0
33
92
3
162
17
42
29
10
1.82
30657--30741
16
5.2
16
68
16
66
16
45
27
10
1.80

Tables:   1

The End!