Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009304.1 Corchorus capsularis cultivar CVL-1 contig09325, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10987

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7860--7913
13
3.5
17
69
21
55
22
22
0
55
1.44
7845--7923
29
2.8
28
83
14
101
21
21
0
56
1.42
7860--7923
29
2.2
29
91
5
103
20
20
0
59
1.38
7811--7992
26
7.0
26
73
19
123
21
22
2
53
1.59
7941--8019
27
2.9
27
74
20
67
21
25
2
50
1.61
8177--8223
24
2.0
24
91
0
76
36
17
4
42
1.68
8559--8648
29
3.2
29
65
15
71
23
22
7
46
1.77
8509--8784
55
5.0
55
91
0
428
24
18
7
50
1.72
9574--9900
49
6.7
49
80
8
319
35
15
6
42
1.74
9688--9878
92
2.1
91
88
2
274
35
16
6
41
1.74
9864--9932
30
2.3
29
80
7
75
36
8
1
53
1.41

Tables:   1

The End!