Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009305.1 Corchorus capsularis cultivar CVL-1 contig09326, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12426

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1084--1125
16
2.4
18
88
7
61
21
2
0
76
0.90
1096--1128
12
3.0
11
87
12
50
18
0
0
81
0.68
1274--1304
16
1.9
16
93
0
53
48
9
9
32
1.69
1361--1386
12
2.2
12
100
0
52
50
15
15
19
1.79
1559--1633
27
2.8
27
87
0
105
46
26
12
14
1.79
2263--2305
19
2.3
19
88
4
61
30
27
6
34
1.83
6829--6864
19
1.9
18
88
5
54
41
5
22
30
1.76

Tables:   1

The End!