Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009307.1 Corchorus capsularis cultivar CVL-1 contig09328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22313

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
460--487
6
4.7
6
100
0
56
0
0
50
50
1.00
9736--9760
13
1.9
13
100
0
50
44
0
16
40
1.47
9816--9853
3
12.7
3
100
0
76
34
0
0
65
0.93
10428--10455
2
14.0
2
100
0
56
50
0
0
50
1.00
11037--11104
31
2.3
31
76
5
77
38
7
25
29
1.83
13734--13769
2
17.5
2
88
5
54
44
0
2
52
1.15
16767--16995
75
3.1
75
98
0
440
42
16
15
26
1.87

Tables:   1

The End!